BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A08SP1|AL425623
(737 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1380 1426 0.0
>3x_Contig1380
Length = 6718
Score = 1426 bits (718), Expect = 0.0
Identities = 734/738 (99%), Gaps = 2/738 (0%)
Strand = Plus / Minus
Query: 1 caacatcatcatcactaacattgaaagamaagttattatctgccgaag-aatagatacat 59
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 3763 caacatcatcatcactaacattgaaagacaagttattatctgccgaaggaatagatacat 3704
Query: 60 cactttcttccacataattctgcaaataatcctgcgtatctgaagaacttgaagcatccg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3703 cactttcttccacataattctgcaaataatcctgcgtatctgaagaacttgaagcatccg 3644
Query: 120 agtcgccatctcccaaatacacggagtaaccatcaccatcgaacaccaagctatttctcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3643 agtcgccatctcccaaatacacggagtaaccatcaccatcgaacaccaagctatttctcc 3584
Query: 180 tcttattcttattatcaggagaaagatatggcggtaagtgcgatttgtaatggaatgggt 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3583 tcttattcttattatcaggagaaagatatggcggtaagtg-gatttgtaatggaatgggt 3525
Query: 240 acttcgtatttattcatcggcgaatctgatctaatgtacagttccgatgcagtgttttcg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3524 acttcgtatttattcatcggcgaatctgatctaatgtacagttccgatgcagtgttttcg 3465
Query: 300 tttggcagcaaaattggtctctcttgaaagtccaaggtacaattgttaccggatcttgga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3464 tttggcagcaaaattggtctctcttgaaagtccaaggtacaattgttaccggatcttgga 3405
Query: 360 ttgtaggtttcgatagtttccacgattatagattgtatcgaattgtttcttgagtgggat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3404 ttgtaggtttcgatagtttccacgattatagattgtatcgaattgtttcttgagtgggat 3345
Query: 420 ttacgcggagatccatcaggagtggcatggatactaccagaatggtccattgtgctcata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3344 ttacgcggagatccatcaggagtggcatggatactaccagaatggtccattgtgctcata 3285
Query: 480 ctttgatacctattatgatgatcccatatttctttcggcacaggaacgttaactttcttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3284 ctttgatacctattatgatgatcccatatttctttcggcacaggaacgttaactttcttg 3225
Query: 540 gaataatcaacaaacgtgggcatttcctcatgcatgtttaacgatgccggatacacaatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3224 gaataatcaacaaacgtgggcatttcctcatgcatgtttaacgatgccggatacacaatt 3165
Query: 600 ttgctaggagactctgaccttgaacaactcattcttgtatgagatttgtctgaatctagg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3164 ttgctaggagactctgaccttgaacaactcattcttgtatgagatttgtctgaatctagg 3105
Query: 660 aagtgaggatttttctcatgtccaaagtgactatkaggatggttttcttcatcattatca 719
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3104 aagtgaggatttttctcatgtccaaagtgactattaggatggttttcttcatcattatca 3045
Query: 720 atagttgtatcaatgtcg 737
||||||||||||||||||
Sbjct: 3044 atagttgtatcaatgtcg 3027
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5708
Number of Sequences: 1807
Number of extensions: 5708
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 737
length of database: 10,358,551
effective HSP length: 16
effective length of query: 721
effective length of database: 10,329,639
effective search space: 7447669719
effective search space used: 7447669719
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)